A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution

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A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution. / Cardenuto, Marcelo Hidalgo; Cezar, Henrique M.; Mikkelsen, Kurt Valentin; Sauer, Stephan P. A.; Coutinho, Kaline; Canuto, Sylvio.

In: Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, Vol. 251, 119434, 2021.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Cardenuto, MH, Cezar, HM, Mikkelsen, KV, Sauer, SPA, Coutinho, K & Canuto, S 2021, 'A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution', Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, vol. 251, 119434. https://doi.org/10.1016/j.saa.2021.119434

APA

Cardenuto, M. H., Cezar, H. M., Mikkelsen, K. V., Sauer, S. P. A., Coutinho, K., & Canuto, S. (2021). A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 251, [119434]. https://doi.org/10.1016/j.saa.2021.119434

Vancouver

Cardenuto MH, Cezar HM, Mikkelsen KV, Sauer SPA, Coutinho K, Canuto S. A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. 2021;251. 119434. https://doi.org/10.1016/j.saa.2021.119434

Author

Cardenuto, Marcelo Hidalgo ; Cezar, Henrique M. ; Mikkelsen, Kurt Valentin ; Sauer, Stephan P. A. ; Coutinho, Kaline ; Canuto, Sylvio. / A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution. In: Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. 2021 ; Vol. 251.

Bibtex

@article{659bab913bb14c05865452874a0ceb70,
title = "A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution",
abstract = "We present a detailed theoretical study of the electronic absorption spectra and thermochemistry of molecular photoswitches composed of one and two photochromic units of dihydroazulene (DHA)/vinylheptafulvene (VHF) molecules. Six different isomers are considered depending on the ring opening/closure forms of the DHA units. The solvent effect of acetonitrile is investigated using a sequential Molecular Mechanics/Quantum Mechanics approach. The thermochemical investigations of these photochromic molecules were performed using the Free Energy Perturbation method, and the simulations were performed using Configurational Bias Monte Carlo. We show that to open the 5-member ring of the DHA, there is no significant gain in thermal release of energy for the back reaction when a unit or two DHA units are considered. Overall, we found agreement between the solvation free energy based on Monte Carlo simulations and the continuum solvent model. However, the cavitation term in the continuum model is shown to be a source of disagreement when the non-electrostatic terms are compared. The electronic absorption spectra are calculated using TDDFT CAM-B3LYP/cc-pVDZ. Agreement with experiment is obtained within 0.1 eV, considering statistically uncorrelated configurations from the simulations. Inhomogeneous broadening is also considered and found to be well described in all cases.",
keywords = "Faculty of Science, QM/MM method, absorption spectroscopy, Electronic structure, photoswitches, Solvent effects",
author = "Cardenuto, {Marcelo Hidalgo} and Cezar, {Henrique M.} and Mikkelsen, {Kurt Valentin} and Sauer, {Stephan P. A.} and Kaline Coutinho and Sylvio Canuto",
year = "2021",
doi = "10.1016/j.saa.2021.119434",
language = "English",
volume = "251",
journal = "Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy",
issn = "1386-1425",
publisher = "Elsevier",

}

RIS

TY - JOUR

T1 - A QM/MM study of the conformation stability and electronic structure of the photochromic switches derivatives of DHA/VHF in acetonitrile solution

AU - Cardenuto, Marcelo Hidalgo

AU - Cezar, Henrique M.

AU - Mikkelsen, Kurt Valentin

AU - Sauer, Stephan P. A.

AU - Coutinho, Kaline

AU - Canuto, Sylvio

PY - 2021

Y1 - 2021

N2 - We present a detailed theoretical study of the electronic absorption spectra and thermochemistry of molecular photoswitches composed of one and two photochromic units of dihydroazulene (DHA)/vinylheptafulvene (VHF) molecules. Six different isomers are considered depending on the ring opening/closure forms of the DHA units. The solvent effect of acetonitrile is investigated using a sequential Molecular Mechanics/Quantum Mechanics approach. The thermochemical investigations of these photochromic molecules were performed using the Free Energy Perturbation method, and the simulations were performed using Configurational Bias Monte Carlo. We show that to open the 5-member ring of the DHA, there is no significant gain in thermal release of energy for the back reaction when a unit or two DHA units are considered. Overall, we found agreement between the solvation free energy based on Monte Carlo simulations and the continuum solvent model. However, the cavitation term in the continuum model is shown to be a source of disagreement when the non-electrostatic terms are compared. The electronic absorption spectra are calculated using TDDFT CAM-B3LYP/cc-pVDZ. Agreement with experiment is obtained within 0.1 eV, considering statistically uncorrelated configurations from the simulations. Inhomogeneous broadening is also considered and found to be well described in all cases.

AB - We present a detailed theoretical study of the electronic absorption spectra and thermochemistry of molecular photoswitches composed of one and two photochromic units of dihydroazulene (DHA)/vinylheptafulvene (VHF) molecules. Six different isomers are considered depending on the ring opening/closure forms of the DHA units. The solvent effect of acetonitrile is investigated using a sequential Molecular Mechanics/Quantum Mechanics approach. The thermochemical investigations of these photochromic molecules were performed using the Free Energy Perturbation method, and the simulations were performed using Configurational Bias Monte Carlo. We show that to open the 5-member ring of the DHA, there is no significant gain in thermal release of energy for the back reaction when a unit or two DHA units are considered. Overall, we found agreement between the solvation free energy based on Monte Carlo simulations and the continuum solvent model. However, the cavitation term in the continuum model is shown to be a source of disagreement when the non-electrostatic terms are compared. The electronic absorption spectra are calculated using TDDFT CAM-B3LYP/cc-pVDZ. Agreement with experiment is obtained within 0.1 eV, considering statistically uncorrelated configurations from the simulations. Inhomogeneous broadening is also considered and found to be well described in all cases.

KW - Faculty of Science

KW - QM/MM method

KW - absorption spectroscopy

KW - Electronic structure

KW - photoswitches

KW - Solvent effects

U2 - 10.1016/j.saa.2021.119434

DO - 10.1016/j.saa.2021.119434

M3 - Journal article

C2 - 33465576

VL - 251

JO - Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy

JF - Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy

SN - 1386-1425

M1 - 119434

ER -

ID: 255002150