Evolution and applications of plant pathway resources and databases

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Evolution and applications of plant pathway resources and databases. / Sucaet, Yves; Deva, Taru.

In: Briefings in Bioinformatics, Vol. 12, No. 5, 09.2011, p. 530-544.

Research output: Contribution to journal › Journal article › Research › peer-review

Harvard

Sucaet, Y & Deva, T 2011, 'Evolution and applications of plant pathway resources and databases', Briefings in Bioinformatics, vol. 12, no. 5, pp. 530-544. https://doi.org/10.1093/bib/bbq083

APA

Sucaet, Y., & Deva, T. (2011). Evolution and applications of plant pathway resources and databases. Briefings in Bioinformatics, 12(5), 530-544. https://doi.org/10.1093/bib/bbq083

Vancouver

Sucaet Y, Deva T. Evolution and applications of plant pathway resources and databases. Briefings in Bioinformatics. 2011 Sep;12(5):530-544. https://doi.org/10.1093/bib/bbq083

Author

Sucaet, Yves ; Deva, Taru. / Evolution and applications of plant pathway resources and databases. In: Briefings in Bioinformatics. 2011 ; Vol. 12, No. 5. pp. 530-544.

Bibtex

@article{dc178e3d51404d4c9209d917aa6e1703,
title = "Evolution and applications of plant pathway resources and databases",
abstract = "Plants are important sources of food and plant products are essential for modern human life. Plants are increasingly gaining importance as drug and fuel resources, bioremediation tools and as tools for recombinant technology. Considering these applications, database infrastructure for plant model systems deserves much more attention. Study of plant biological pathways, the interconnection between these pathways and plant systems biology on the whole has in general lagged behind human systems biology. In this article we review plant pathway databases and the resources that are currently available. We lay out trends and challenges in the ongoing efforts to integrate plant pathway databases and the applications of database integration. We also discuss how progress in non-plant communities can serve as an example for the improvement of the plant pathway database landscape and thereby allow quantitative modeling of plant biosystems. We propose Good Database Practice as a possible model for collaboration and to ease future integration efforts.",
keywords = "Former Faculty of Pharmaceutical Sciences",
author = "Yves Sucaet and Taru Deva",
note = "Keywords: Plant pathway databases; database integration; applications of integration",
year = "2011",
month = sep,
doi = "10.1093/bib/bbq083",
language = "English",
volume = "12",
pages = "530--544",
journal = "Briefings in Bioinformatics",
issn = "1467-5463",
publisher = "Oxford University Press",
number = "5",

}

RIS

TY - JOUR

T1 - Evolution and applications of plant pathway resources and databases

AU - Sucaet, Yves

AU - Deva, Taru

N1 - Keywords: Plant pathway databases; database integration; applications of integration

PY - 2011/9

Y1 - 2011/9

N2 - Plants are important sources of food and plant products are essential for modern human life. Plants are increasingly gaining importance as drug and fuel resources, bioremediation tools and as tools for recombinant technology. Considering these applications, database infrastructure for plant model systems deserves much more attention. Study of plant biological pathways, the interconnection between these pathways and plant systems biology on the whole has in general lagged behind human systems biology. In this article we review plant pathway databases and the resources that are currently available. We lay out trends and challenges in the ongoing efforts to integrate plant pathway databases and the applications of database integration. We also discuss how progress in non-plant communities can serve as an example for the improvement of the plant pathway database landscape and thereby allow quantitative modeling of plant biosystems. We propose Good Database Practice as a possible model for collaboration and to ease future integration efforts.

AB - Plants are important sources of food and plant products are essential for modern human life. Plants are increasingly gaining importance as drug and fuel resources, bioremediation tools and as tools for recombinant technology. Considering these applications, database infrastructure for plant model systems deserves much more attention. Study of plant biological pathways, the interconnection between these pathways and plant systems biology on the whole has in general lagged behind human systems biology. In this article we review plant pathway databases and the resources that are currently available. We lay out trends and challenges in the ongoing efforts to integrate plant pathway databases and the applications of database integration. We also discuss how progress in non-plant communities can serve as an example for the improvement of the plant pathway database landscape and thereby allow quantitative modeling of plant biosystems. We propose Good Database Practice as a possible model for collaboration and to ease future integration efforts.

KW - Former Faculty of Pharmaceutical Sciences

U2 - 10.1093/bib/bbq083

DO - 10.1093/bib/bbq083

M3 - Journal article

C2 - 21949268

VL - 12

SP - 530

EP - 544

JO - Briefings in Bioinformatics

JF - Briefings in Bioinformatics

SN - 1467-5463

IS - 5

ER -

ID: 35936949