Samir Bhatt

Samir Bhatt

Professor

ORCID: 0000-0002-0891-4611

Introductory remarks on publicationslist

Google Scholar publication list https://scholar.google.com/citations?user=tL0x_vUAAAAJ&hl=en


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  1. Published

    Danish Pathology Life Course (PATHOLIFE) cohort: a register based cohort extending upon a national tissue biobank

    Yde, Pernille, Bartholdy, Andreas, Gjerdrum, Lise Mette Rahbek, Westendorp, Rudi GJ, Mortensen, Laust Hvas, Bhatt, Samir & Jensen, Majken Karoline, 2023, In: BMJ Open. 13, 4, 10 p., e068483.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Reduction in mobility and COVID-19 transmission

    Nouvellet, P., Bhatia, S., Cori, A., Ainslie, K. E. C., Baguelin, M., Bhatt, S., Boonyasiri, A., Brazeau, N. F., Cattarino, L., Cooper, L. V., Coupland, H., Cucunuba, Z. M., Cuomo-Dannenburg, G., Dighe, A., Djaafara, B. A., Dorigatti, I., Eales, O. D., van Elsland, S. L., Nascimento, F. F., FitzJohn, R. G. & 30 others, Gaythorpe, K. A. M., Geidelberg, L., Green, W. D., Hamlet, A., Hauck, K., Hinsley, W., Imai, N., Jeffrey, B., Knock, E., Laydon, D. J., Lees, J. A., Mangal, T., Mellan, T. A., Nedjati-Gilani, G., Parag, K. V., Pons-Salort, M., Ragonnet-Cronin, M., Riley, S., Unwin, H. J. T., Verity, R., Vollmer, M. A. C., Volz, E., Walker, P. G. T., Walters, C. E., Wang, H., Watson, O. J., Whittaker, Charles Frederick, Whittles, L. K., Xi, X. & Ferguson, N. M., 2021, In: Nature Communications. 12, 1, 1090.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Misclassification bias in estimating clinical severity of SARS-CoV-2 variants – Authors' reply

    Nyberg, T., Ferguson, N. M., Blake, J., Hinsley, W., Bhatt, Samir, De Angelis, D., Thelwall, S. & Presanis, A. M., 2022, In: The Lancet. 400, 10355, p. 809-810 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  4. Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study

    Nyberg, T., Ferguson, N. M., Nash, S. G., Webster, H. H., Flaxman, S., Andrews, N., Hinsley, W., Bernal, J. L., Kall, M., Bhatt, S., Blomquist, P., Zaidi, A., Volz, E., Aziz, N. A., Harman, K., Funk, S., Abbott, S., Hope, R., Charlett, A., Chand, M. & 7 others, Ghani, A. C., Seaman, S. R., Dabrera, G., De Angelis, D., Presanis, A. M., Thelwall, S. & COVID 19 Genom UK COG UK Consortiu, C. 1. G. U. C. U. C., 2022, In: Lancet. 399, 10332, p. 1303-1312 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Have deaths from COVID-19 in Europe plateaued due to herd immunity?

    Okell, L., Verity, R., Watson, O., Mishra, S., Walker, P., Whittaker, C., Katzourakis, A., Donnelly, C., Riley, S., Ghani, A. C., Gandy, A., Flaxman, S., Ferguson, N. & Bhatt, Samir, 20 Jun 2020, In: The Lancet.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Unifying incidence and prevalence under a time-varying general branching process

    Pakkanen, M. S., Miscouridou, X., Penn, M. J., Whittaker, Charles Frederick, Berah, T., Mishra, S., Mellan, T. A. & Bhatt, Samir, 2023, In: Journal of Mathematical Biology. 87, 2, 34 p., 35.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Leaping through Tree Space: Continuous Phylogenetic Inference for Rooted and Unrooted Trees

    Penn, M. J., Scheidwasser, Neil Alexandre, Penn, J., Donnelly, C. A., Duchene, David & Bhatt, Samir, 2023, In: Genome Biology and Evolution. 15, 12, 17 p., evad213.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Intrinsic randomness in epidemic modelling beyond statistical uncertainty

    Penn, M. J., Laydon, D. J., Penn, J., Whittaker, Charles Frederick, Morgenstern, C., Ratmann, O., Mishra, S., Pakkanen, M. S., Donnelly, C. A. & Bhatt, Samir, 2023, In: Communications Physics. 6, 1, 9 p., 146.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    The overlapping burden of the three leading causes of disability and death in sub-Saharan African children

    LBD Triple Burden Collaborators, L. T. B. C., 2022, In: Nature Communications. 13, 1, 7457.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Cancer burden among adolescents and young adults in relation to childhood adversity: a nationwide life-course cohort study of 1.2 million individuals

    Rod, Naja Hulvej, Bengtsson, J., Elsenburg, Leonie K., Davies, Megan, Taylor-Robinson, D., Bhatt, Samir & Rieckmann, Andreas, 2023, In: The Lancet Regional Health - Europe. 27, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Inference of malaria reproduction numbers in three elimination settings by combining temporal data and distance metrics

    Routledge, I., Unwin, H. J. T. & Bhatt, Samir, 2021, In: Scientific Reports. 11, 1, 14495.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach

    Routledge, I., Pascual, M. (ed.), Lai, S., Battle, K. E., Ghani, A. C., Gomez-Rodriguez, M., Gustafson, K. B., Mishra, S., Unwin, J., Proctor, J. L., Tatem, A. J., Li, Z. & Bhatt, Samir, 2020, (E-pub ahead of print) In: PLOS Computational Biology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Modeling DREAMS impact: trends in new HIV diagnoses among women attending antenatal care clinics in DREAMS countries

    Saul, J., Cooney, C., Hosseini, P. R., Beamon, T., Toiv, N., Bhatt, Samir, Zaidi, I. & Birx, D., 2022, In: AIDS. 36, p. S51-S59 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Track Omicron's spread with molecular data

    Scott, L., Hsiao, N., Moyo, S., Singh, L., Tegally, H., Dor, G., Maes, P., Pybus, O. G., Kraemer, M. U. G., Semenova, E., Bhatt, Samir, Flaxman, S., Faria, N. R. & de Oliveira, T., 2021, In: Science. 374, 6574, p. 1454-1455 10 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  15. PriorVAE: Encoding spatial priors with variational autoencoders for small-area estimation

    Semenova, E., Xu, Y., Howes, A., Rashid, T., Bhatt, Samir, Mishra, S. & Flaxman, S., 2022, In: Journal of the Royal Society Interface. 19, 191, 11 p., 20220094.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. State-level tracking of COVID-19 in the United States

    Unwin, H. J. T., Mishra, S., Bradley, V. C., Gandy, A., Mellan, T. A., Coupland, H., Ish-Horowicz, J., Vollmer, M. A. C., Whittaker, C., Filippi, S. L., Xi, X., Monod, M., Ratmann, O., Hutchinson, M., Valka, F., Zhu, H., Hawryluk, I., Milton, P., Ainslie, K. E. C., Baguelin, M. & 33 others, Boonyasiri, A., Brazeau, N. F., Cattarino, L., Cucunuba, Z., Cuomo-Dannenburg, G., Dorigatti, I., Eales, O. D., Eaton, J. W., Elsland, S. L. V., FitzJohn, R. G., Gaythorpe, K. A. M., Green, W., Hinsley, W., Jeffrey, B., Knock, E., Laydon, D. J., Lees, J., Nedjati-Gilani, G., Nouvellet, P., Okell, L., Parag, K. V., Siveroni, I., Thompson, H. A., Walker, P., Walters, C. E., Watson, O. J., Whittles, L. K., Ghani, A. C., Ferguson, N. M., Riley, S., Donnelly, C. A., Bhatt, Samir & Flaxman, S., 2020, In: Nature Communications. 11, 6189 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Global, regional, and national minimum estimates of children affected by COVID-19-associated orphanhood and caregiver death, by age and family circumstance up to Oct 31, 2021: an updated modelling study

    Unwin, H. J. T., Hillis, S., Cluver, L., Flaxman, S., Goldman, P. S., Butchart, A., Bachman, G., Rawlings, L., Donnelly, C. A., Ratmann, O., Green, P., Nelson, C. A., Blenkinsop, A., Bhatt, Samir, Desmond, C., Villaveces, A. & Sherr, L., 2022, In: The Lancet Child & Adolescent Health. 6, 4, p. 249-259 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Using hawkes processes to model imported and local malaria cases in near-elimination settings

    Unwin, J. T. H., Routledge, I., Flaxman, S., Rizoiu, M. A., Lai, S., Cohen, J., Weiss, D. J., Mishra, S. & Bhatt, Samir, 2021, In: PLOS Computational Biology. 17, 4, e1008830.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    A unified machine learning approach to time series forecasting applied to demand at emergency departments

    Vollmer, M. A. C., Glampson, B., Mellan, T., Mishra, S., Mercuri, L., Costello, C., Klaber, R., Cooke, G., Flaxman, S. & Bhatt, Samir, 2021, In: BMC Emergency Medicine. 21, 1, 14 p., 9.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

    Volz, E., Mishra, S., Chand, M., Barrett, J. C., Johnson, R., Geidelberg, L., Hinsley, W. R., Laydon, D. J., Dabrera, G., O’Toole, Á., Amato, R., Ragonnet-Cronin, M., Harrison, I., Jackson, B., Ariani, C. V., Boyd, O., Loman, N. J., McCrone, J. T., Gonçalves, S., Jørgensen, D. & 14 others, Myers, R., Hill, V., Jackson, D. K., Gaythorpe, K., Groves, N., Sillitoe, J., Kwiatkowski, D. P., Flaxman, S., Ratmann, O., Bhatt, Samir, Hopkins, S., Gandy, A., Rambaut, A. & Ferguson, N. M., 13 May 2021, In: Nature. 593, p. 266-269 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. The impact of COVID-19 and strategies for mitigation and suppression in low- And middle-income countries

    Walker, P. G. T., Whittaker, C., Watson, O. J., Baguelin, M., Winskill, P., Hamlet, A., Djafaara, B. A., Cucunubá, Z., Mesa, D. O., Green, W., Thompson, H., Nayagam, S., Ainslie, K. E. C., Bhatia, S., Bhatt, S., Boonyasiri, A., Boyd, O., Brazeau, N. F., Cattarino, L., Cuomo-Dannenburg, G. & 29 others, Dighe, A., Donnelly, C. A., Dorigatti, I., Van Elsland, S. L., FitzJohn, R., Fu, H., Gaythorpe, K. A. M., Geidelberg, L., Grassly, N., Haw, D., Hayes, S., Hinsley, W., Imai, N., Jørgensen, D., Knock, E., Laydon, D., Mishra, S., Nedjati-Gilani, G., Okell, L. C., Unwin, H. J., Verity, R., Vollmer, M., Walters, C. E., Wang, H., Wang, Y., Xi, X., Lalloo, D. G., Ferguson, N. M. & Ghani, A. C., 2020, In: Science. 369, 6502, p. 413-422 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Leveraging community mortality indicators to infer COVID-19 mortality and transmission dynamics in Damascus, Syria

    Watson, O. J., Alhaffar, M., Mehchy, Z., Whittaker, C., Akil, Z., Brazeau, N. F., Cuomo-Dannenburg, G., Hamlet, A., Thompson, H. A., Baguelin, M., FitzJohn, R. G., Knock, E., Lees, J. A., Whittles, L. K., Mellan, T., Winskill, P., Bhatt, S., Djaafara, B. A., Donnelly, C. A., Flaxman, S. & 15 others, Gaythorpe, K. A. M., Imai, N., Jauneikaite, E., Laydon, D. J., Mishra, S., Unwin, H. J. T., Verity, R., Howard, N., Clapham, H., Checchi, F., Ferguson, N., Ghani, A., Beals, E., Walker, P. & Imperial College COVID-19 Response Team, I. C. C. R. T., Jan 2021, In: Nature Communications. 12, 1, 13 p., 2394.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Indirect effects of the COVID-19 pandemic on malaria intervention coverage, morbidity, and mortality in Africa: a geospatial modelling analysis

    Weiss, D. J., Bertozzi-Villa, A., Rumisha, S. F., Amratia, P., Arambepola, R., Battle, K. E., Cameron, E., Chestnutt, E., Gibson, H. S., Harris, J., Keddie, S., Millar, J. J., Rozier, J., Symons, T. L., Vargas-Ruiz, C., Hay, S. I., Smith, D. L., Alonso, P. L., Noor, A. M., Bhatt, S. & 1 others, Gething, P. W., 2021, In: The Lancet Infectious Diseases. 21, 1, p. 59-69 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    A novel statistical framework for exploring the population dynamics and seasonality of mosquito populations

    Whittaker, C., Winskill, P., Sinka, M., Pironon, S., Massey, C., Weiss, D. J., Nguyen, M., Gething, P. W., Kumar, A., Ghani, A. & Bhatt, Samir, 2022, In: Proceedings. Biological sciences. 289, 1972, 10 p., 20220089.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Seasonal dynamics of Anopheles stephensi and its implications for mosquito detection and emergent malaria control in the Horn of Africa

    Whittaker, Charles Frederick, Hamlet, A., Sherrard-Smith, E., Winskill, P., Cuomo-Dannenburg, G., Walker, P. G. T., Sinka, M., Pironon, S., Kumar, A., Ghani, A., Bhatt, Samir & Churcher, T. S., 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 8, 9 p., e2216142120.

    Research output: Contribution to journal › Journal article › Research › peer-review

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