Samir Bhatt

Samir Bhatt

Professor

ORCID: 0000-0002-0891-4611

Introductory remarks on publicationslist

Google Scholar publication list https://scholar.google.com/citations?user=tL0x_vUAAAAJ&hl=en


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  1. Published

    π VAE: a stochastic process prior for Bayesian deep learning with MCMC

    Mishra, S., Flaxman, S., Berah, T., Zhu, H., Pakkanen, M. & Bhatt, Samir, 2022, In: Statistics and Computing. 32, 6, 16 p., 96.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. A COVID-19 model for local authorities of the United Kingdom

    Mishra, S., Scott, J. A., Laydon, D. J., Zhu, H., Ferguson, N. M., Bhatt, Samir, Flaxman, S. & Gandy, A., 2022, In: Journal of the Royal Statistical Society. Series A: Statistics in Society. 185, p. S86-S95 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    A dataset of non-pharmaceutical interventions on SARS-CoV-2 in Europe

    Altman, G., Ahuja, J., Monrad, J. T., Dhaliwal, G., Rogers-Smith, C., Leech, G., Snodin, B., Sandbrink, J. B., Finnveden, L., Norman, A. J., Oehm, S. B., Sandkuehler, J. F., Kulveit, J., Flaxman, S., Gal, Y., Mishra, S., Bhatt, Samir, Sharma, M., Mindermann, S. & Brauner, J. M., 2022, In: Scientific Data. 9, 1, 9 p., 145.

    Research output: Contribution to journal › Editorial › Research › peer-review

  4. Published

    A novel statistical framework for exploring the population dynamics and seasonality of mosquito populations

    Whittaker, C., Winskill, P., Sinka, M., Pironon, S., Massey, C., Weiss, D. J., Nguyen, M., Gething, P. W., Kumar, A., Ghani, A. & Bhatt, Samir, 2022, In: Proceedings. Biological sciences. 289, 1972, 10 p., 20220089.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    A unified machine learning approach to time series forecasting applied to demand at emergency departments

    Vollmer, M. A. C., Glampson, B., Mellan, T., Mishra, S., Mercuri, L., Costello, C., Klaber, R., Cooke, G., Flaxman, S. & Bhatt, Samir, 2021, In: BMC Emergency Medicine. 21, 1, 14 p., 9.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    An archetypes approach to malaria intervention impact mapping: a new framework and example application

    Bertozzi-Villa, A., Bever, C. A., Gerardin, J., Proctor, J. L., Wu, M., Harding, D., Hollingsworth, T. D., Bhatt, Samir & Gething, P. W., 2023, In: Malaria Journal. 22, 1, 22 p., 138.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Application of referenced thermodynamic integration to Bayesian model selection

    Hawryluk, I., Mishra, S., Flaxman, S., Bhatt, Samir & Mellan, T. A., 2023, In: PLoS ONE. 18, 8, 16 p., e0289889.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

    Volz, E., Mishra, S., Chand, M., Barrett, J. C., Johnson, R., Geidelberg, L., Hinsley, W. R., Laydon, D. J., Dabrera, G., O’Toole, Á., Amato, R., Ragonnet-Cronin, M., Harrison, I., Jackson, B., Ariani, C. V., Boyd, O., Loman, N. J., McCrone, J. T., Gonçalves, S., Jørgensen, D. & 14 others, Myers, R., Hill, V., Jackson, D. K., Gaythorpe, K., Groves, N., Sillitoe, J., Kwiatkowski, D. P., Flaxman, S., Ratmann, O., Bhatt, Samir, Hopkins, S., Gandy, A., Rambaut, A. & Ferguson, N. M., 13 May 2021, In: Nature. 593, p. 266-269 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Assessment of COVID-19 as the Underlying Cause of Death Among Children and Young People Aged 0 to 19 Years in the US

    Flaxman, S., Whittaker, C., Semenova, E., Rashid, T., Parks, R. M., Blenkinsop, A., Unwin, H. J. T., Mishra, S., Bhatt, Samir, Gurdasani, D. & Ratmann, O., 2023, In: JAMA network open. 6, 1, 9 p., e2253590.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. E-pub ahead of print

    Bayesian workflow for time-varying transmission in stratified compartmental infectious disease transmission models

    Bouman, J. A., Hauser, A., Grimm, S. L., Wohlfender, M., Bhatt, Samir, Semenova, E., Gelman, A., Althaus, C. L. & Riou, J., 2024, (E-pub ahead of print) In: PLOS Computational Biology. 20, 4 April, e1011575.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Cancer burden among adolescents and young adults in relation to childhood adversity: a nationwide life-course cohort study of 1.2 million individuals

    Rod, Naja Hulvej, Bengtsson, J., Elsenburg, Leonie K., Davies, Megan, Taylor-Robinson, D., Bhatt, Samir & Rieckmann, Andreas, 2023, In: The Lancet Regional Health - Europe. 27, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Changing composition of SARS-CoV-2 lineages and rise of Delta variant in England

    Mishra, S., Mindermann, S., Sharma, M., Whittaker, C., Mellan, T. A., Wilton, T., Klapsa, D., Mate, R., Fritzsche, M., Zambon, M., Ahuja, J., Howes, A., Miscouridou, X., Nason, G. P., Ratmann, O., Semenova, E., Leech, G., Sandkuehler, J. F., Rogers-Smith, C., Vollmer, M. & 10 others, Unwin, H. J. T., Gal, Y., Chand, M., Gandy, A., Martin, J., Volz, E., Ferguson, N. M., Bhatt, Samir, Brauner, J. M. & Flaxman, S., 2021, In: EClinicalMedicine. 39, 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study

    Nyberg, T., Ferguson, N. M., Nash, S. G., Webster, H. H., Flaxman, S., Andrews, N., Hinsley, W., Bernal, J. L., Kall, M., Bhatt, S., Blomquist, P., Zaidi, A., Volz, E., Aziz, N. A., Harman, K., Funk, S., Abbott, S., Hope, R., Charlett, A., Chand, M. & 7 others, Ghani, A. C., Seaman, S. R., Dabrera, G., De Angelis, D., Presanis, A. M., Thelwall, S. & COVID 19 Genom UK COG UK Consortiu, C. 1. G. U. C. U. C., 2022, In: Lancet. 399, 10332, p. 1303-1312 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Comparing the responses of the UK, Sweden and Denmark to COVID-19 using counterfactual modelling

    Mishra, S., Scott, J. A., Laydon, D. J., Flaxman, S., Gandy, A., Mellan, T. A., Unwin, H. J. T., Vollmer, M., Coupland, Helen Louise, Ratmann, O., Monod, M., Zhu, H. H., Cori, A., Gaythorpe, K. A. M., Whittles, L. K., Whittaker, C., Donnelly, C. A., Ferguson, N. M. & Bhatt, Samir, 2021, In: Scientific Reports. 11, 1, 16342.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Conflicting COVID-19 excess mortality estimates

    Bager, P., Nielsen, J., Bhatt, Samir, Nielsen, L., Krause, T. G., Vestergaard, L. S. & The EuroMOMO Network, T. E. N., 2023, In: The Lancet. 401, 10375, p. 432-433 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  16. Published

    Context-specific emergence and growth of the SARS-CoV-2 Delta variant

    McCrone, J. T., Hill, V., Bajaj, S., Pena, R. E., Lambert, B. C., Inward, R., Bhatt, S., Volz, E., Ruis, C., Dellicour, S., Baele, G., Zarebski, A. E., Sadilek, A., Wu, N., Schneider, A., Ji, X., Raghwani, J., Jackson, B., Colquhoun, R., O’Toole, Á. & 21 others, Peacock, T. P., Twohig, K., Thelwall, S., Dabrera, G., Myers, R., Faria, N. R., Huber, C., Bogoch, I. I., Khan, K., du Plessis, L., Barrett, J. C., Aanensen, D. M., Barclay, W. S., Chand, M., Connor, T., Loman, N. J., Suchard, M. A., Pybus, O. G., Rambaut, A., Kraemer, M. U. G. & The COVID-19 Genomics UK (COG-UK) Consortium, T. C. G. U. (. C., 2022, In: Nature. 610, 7930, p. 154-160 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Danish Pathology Life Course (PATHOLIFE) cohort: a register based cohort extending upon a national tissue biobank

    Yde, Pernille, Bartholdy, Andreas, Gjerdrum, Lise Mette Rahbek, Westendorp, Rudi GJ, Mortensen, Laust Hvas, Bhatt, Samir & Jensen, Majken Karoline, 2023, In: BMJ Open. 13, 4, 10 p., e068483.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Database of epidemic trends and control measures during the first wave of COVID-19 in mainland China

    Fu, H., Wang, H., Xi, X., Boonyasiri, A., Wang, Y., Hinsley, W., Fraser, K. J., McCabe, R., Olivera Mesa, D., Skarp, J., Ledda, A., Dewé, T., Dighe, A., Winskill, P., van Elsland, S. L., Ainslie, K. E. C., Baguelin, M., Bhatt, S., Boyd, O., Brazeau, N. F. & 41 others, Cattarino, L., Charles, G., Coupland, Helen Louise, Cucunuba, Z. M., Cuomo-Dannenburg, G., Donnelly, C. A., Dorigatti, I., Eales, O. D., FitzJohn, R. G., Flaxman, S., Gaythorpe, K. A. M., Ghani, A. C., Green, W. D., Hamlet, A., Hauck, K., Haw, D. J., Jeffrey, B., Laydon, D. J., Lees, J. A., Mellan, T., Mishra, S., Nedjati-Gilani, G., Nouvellet, P., Okell, L., Parag, K. V., Ragonnet-Cronin, M., Riley, S., Schmit, N., Thompson, H. A., Unwin, H. J. T., Verity, R., Vollmer, M. A. C., Volz, E., Walker, P. G. T., Walters, C. E., Watson, O. J., Whittaker, C., Whittles, L. K., Imai, N., Bhatia, S. & Ferguson, N. M., 2021, In: International Journal of Infectious Diseases. 102, p. 463-471 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Effectiveness assessment of non-pharmaceutical interventions: lessons learned from the COVID-19 pandemic

    Lison, A., Banholzer, N., Sharma, M., Mindermann, S., Unwin, H. J. T., Mishra, S., Stadler, T., Bhatt, Samir, Ferguson, N. M., Brauner, J. & Vach, W., 2023, In: The Lancet Public Health. 8, 4, p. e311-e317 7 p.

    Research output: Contribution to journal › Review › Research › peer-review

  20. Published

    Effectiveness of social distancing measures and lockdowns for reducing transmission of COVID-19 in non-healthcare, community-based settings

    Murphy, C., Lim, W. W., Mills, C., Wong, J. Y., Chen, D., Xie, Y., Li, M., Gould, S., Xin, H., Cheung, J. K., Bhatt, Samir, Cowling, B. J. & Donnelly, C. A., 2023, In: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 381, 2257, 29 p., 20230132.

    Research output: Contribution to journal › Review › Research › peer-review

  21. Published

    Estimating fine age structure and time trends in human contact patterns from coarse contact data: The Bayesian rate consistency model

    Dan, S., Chen, Y., Chen, Y., Monod, M., Jaeger, V. K., Bhatt, Samir, Karch, A., Ratmann, O. & Machine Learning & Global Health network, M. L. &. G. H. N., 2023, In: PLOS Computational Biology. 19, 6, 30 p., e1011191.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe

    Flaxman, S., Mishra, S., Gandy, A., Unwin, H. J. T., Mellan, T. A., Coupland, H., Whittaker, C., Zhu, H., Berah, T., Eaton, J. W., Monod, M., Perez-Guzman, P. N., Schmit, N., Cilloni, L., Ainslie, K. E. C., Baguelin, M., Boonyasiri, A., Boyd, O., Cattarino, L., Cooper, L. V. & 31 others, Cucunubá, Z., Cuomo-Dannenburg, G., Dighe, A., Djaafara, B., Dorigatti, I., van Elsland, S. L., FitzJohn, R. G., Gaythorpe, K. A. M., Geidelberg, L., Grassly, N. C., Green, W. D., Hallett, T., Hamlet, A., Hinsley, W., Jeffrey, B., Knock, E., Laydon, D. J., Nedjati-Gilani, G., Nouvellet, P., Parag, K. V., Siveroni, I., Thompson, H. A., Verity, R., Volz, E., Walters, C. E., Wang, H., Wang, Y., Watson, O. J., Winskill, P., Bhatt, Samir & Imperial College COVID-19 Response Team, I. C. C. R. T., 2020, In: Nature. 584, 7820, p. 257-261 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Estimating the epidemic reproduction number from temporally aggregated incidence data: A statistical modelling approach and software tool

    Nash, R. K., Bhatt, Samir, Cori, A. & Nouvellet, P., 2023, In: PLOS Computational Biology. 19, 8, 14 p., e1011439.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Evidence of initial success for China exiting COVID-19 social distancing policy after achieving containment

    Ainslie, K. E. C., Walters, C. E., Fu, H., Bhatia, S., Wang, H., Xi, X., Baguelin, M., Bhatt, S., Boonyasiri, A., Boyd, O., Cattarino, L., Ciavarella, C., Cucunuba, Z., Cuomo-Dannenburg, G., Dighe, A., Dorigatti, I., van Elsland, S. L., John, R. F., Gaythorpe, K., Ghani, A. C. & 22 others, Green, W., Hamlet, A., Hinsley, W., Imai, N., Jørgensen, D., Knock, E., Laydon, D., Nedjati-Gilani, G., Okell, L. C., Siveroni, I., Thompson, H. A., Unwin, H. J. T., Verity, R., Vollmer, M., Walker, P. G. T., Wang, Y., Watson, O. J., Whittaker, C., Winskill, P., Donnelly, C. A., Ferguson, N. M. & Riley, S., 2021, In: Wellcome Open Research. 5, p. 1-14 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Evolution and epidemic spread of SARS-CoV-2 in Brazil

    Candido, D. S., Claro, I. M., de Jesus, J. G., Souza, W. M., Moreira, F. R. R., Dellicour, S., Mellan, T. A., du Plessis, L., Pereira, R. H. M., Sales, F. C. S., Manuli, E. R., Thézé, J., Almeida, L., Menezes, M. T., Voloch, C. M., Fumagalli, M. J., Coletti, T. M., da Silva, C. A. M., Ramundo, M. S., Amorim, M. R. & 58 others, Hoeltgebaum, H. H., Mishra, S., Gill, M. S., Carvalho, L. M., Buss, L. F., Prete, C. A., Ashworth, J., Nakaya, H. I., Peixoto, P. S., Brady, O. J., Nicholls, S. M., Tanuri, A., Rossi, Á. D., Braga, C. K. V., Gerber, A. L., de Guimarães, A. P. C., Gaburo, N., Alencar, C. S., Ferreira, A. C. S., Lima, C. X., Levi, J. E., Granato, C., Ferreira, G. M., Francisco, R. S., Granja, F., Garcia, M. T., Moretti, M. L., Perroud, M. W., Castiñeiras, T. M. P. P., Lazari, C. S., Hill, S. C., de Souza Santos, A. A., Simeoni, C. L., Forato, J., Sposito, A. C., Schreiber, A. Z., Santos, M. N. N., de Sá, C. Z., Souza, R. P., Resende-Moreira, L. C., Teixeira, M. M., Hubner, J., Leme, P. A. F., Moreira, R. G., Nogueira, M. L., Ferguson, N. M., Costa, S. F., Proenca-Modena, J. L., Vasconcelos, A. T. R., Bhatt, Samir, Lemey, P., Wu, C. H., Rambaut, A., Loman, N. J., Aguiar, R. S., Pybus, O. G., Sabino, E. C. & Faria, N. R., 4 Sep 2020, In: Science. 369, 6508, p. 1255-1260 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Gaussian Process Nowcasting: Application to COVID-19 Mortality Reporting

    Hawryluk, I., Hoeltgebaum, H., Mishra, S., Miscouridou, X., Schnekenberg, R. P., Whittaker, Charles Frederick, Vollmer, M., Flaxman, S., Bhatt, Samir & Mellan, T. A., 2021, p. 1258-1268. 11 p.

    Research output: Contribution to conference › Paper › Research › peer-review

  27. Published

    Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India

    Dhar, M. S., Marwal, R., Radhakrishnan, V. S., Ponnusamy, K., Jolly, B., Bhoyar, R. C., Sardana, V., Naushin, S., Rophina, M., Mellan, T. A., Mishra, S., Whittaker, C., Fatihi, S., Datta, M., Singh, P., Sharma, U., Ujjainiya, R., Bhatheja, N., Divakar, M. K., Singh, M. K. & 27 others, Imran, M., Senthivel, V., Maurya, R., Jha, N., Mehta, P., Vivekanand, A., Sharma, P., Arvinden, V. R., Chaudhary, U., Soni, N., Thukral, L., Flaxman, S., Bhatt, Samir, Pandey, R., Dash, D., Faruq, M., Lall, H., Gogia, H., Madan, P., Kulkarni, S., Chauhan, H., Sengupta, S., Kabra, S., Gupta, R. K., Singh, S. K., Agrawal, A. & Rakshit, P., 2021, In: Science. 374, 6570, p. 995-999 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Global disparities in SARS-CoV-2 genomic surveillance

    Communicable Diseases Genomics Network (Australia and New Zealand), C. D. G. N. (. A. N. Z., COVID-19 Impact Project, C. I. P., Danish Covid-19 Genome Consortium, D. C. G. C., Fiocruz COVID-19 Genomic Surveillance Network, F. C. G. S. N., GISAID core curation team, G. C. C. T., Network for Genomic Surveillance in South Africa (NGS-SA), N. F. G. S. I. S. A. (., Swiss SARS-CoV-2 Sequencing Consortium, S. S. S. C. & Bulgarian SARS-CoV-2 sequencing group, B. S. S. G., 2022, In: Nature Communications. 13, p. 7003 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    Global disparities in SARS-CoV-2 genomic surveillance

    Brito, A. F., Semenova, E., Dudas, G., Hassler, G. W., Kalinich, C. C., Kraemer, M. U. G., Ho, J., Tegally, H., Githinji, G., Agoti, C. N., Matkin, L. E., Whittaker, C., Howden, B. P., Sintchenko, V., Zuckerman, N. S., Mor, O., Blankenship, H. M., de Oliveira, T., Lin, R. T. P., Siqueira, M. M. & 26 others, Resende, P. C., Vasconcelos, A. T. R., Spilki, F. R., Aguiar, R. S., Alexiev, I., Ivanov, I. N., Philipova, I., Carrington, C. V. F., Sahadeo, N. S. D., Gurry, C., Maurer-Stroh, S., Naidoo, D., von Eije, K. J., Perkins, M. D., van Kerkhove, M., Hill, S. C., Sabino, E. C., Pybus, O. G., Dye, C., Bhatt, Samir, Flaxman, S., Suchard, M. A., Grubaugh, N. D., Baele, G., Faria, N. R. & Danish Covid-19 Genome Consortium, D. C. G. C., 2022, (medRxiv).

    Research output: Working paper › Preprint

  30. Published

    Global, regional, and national minimum estimates of children affected by COVID-19-associated orphanhood and caregiver death, by age and family circumstance up to Oct 31, 2021: an updated modelling study

    Unwin, H. J. T., Hillis, S., Cluver, L., Flaxman, S., Goldman, P. S., Butchart, A., Bachman, G., Rawlings, L., Donnelly, C. A., Ratmann, O., Green, P., Nelson, C. A., Blenkinsop, A., Bhatt, Samir, Desmond, C., Villaveces, A. & Sherr, L., 2022, In: The Lancet Child & Adolescent Health. 6, 4, p. 249-259 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Have deaths from COVID-19 in Europe plateaued due to herd immunity?

    Okell, L., Verity, R., Watson, O., Mishra, S., Walker, P., Whittaker, C., Katzourakis, A., Donnelly, C., Riley, S., Ghani, A. C., Gandy, A., Flaxman, S., Ferguson, N. & Bhatt, Samir, 20 Jun 2020, In: The Lancet.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Impact of proactive and reactive vaccination strategies for health-care workers against MERS-CoV: a mathematical modelling study

    Laydon, D. J., Cauchemez, S., Hinsley, W. R., Bhatt, Samir & Ferguson, N. M., 2023, In: The Lancet Global Health. 11, 5, p. E759-E769 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Indirect effects of the COVID-19 pandemic on malaria intervention coverage, morbidity, and mortality in Africa: a geospatial modelling analysis

    Weiss, D. J., Bertozzi-Villa, A., Rumisha, S. F., Amratia, P., Arambepola, R., Battle, K. E., Cameron, E., Chestnutt, E., Gibson, H. S., Harris, J., Keddie, S., Millar, J. J., Rozier, J., Symons, T. L., Vargas-Ruiz, C., Hay, S. I., Smith, D. L., Alonso, P. L., Noor, A. M., Bhatt, S. & 1 others, Gething, P. W., 2021, In: The Lancet Infectious Diseases. 21, 1, p. 59-69 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Inference of COVID-19 epidemiological distributions from Brazilian hospital data

    Hawryluk, I., Mellan, T. A., Hoeltgebaum, H., Mishra, S., Schnekenberg, R. P., Whittaker, C., Zhu, H., Gandy, A., Donnelly, C. A., Flaxman, S. & Bhatt, Samir, Nov 2020, In: Journal of the Royal Society Interface. 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Inference of malaria reproduction numbers in three elimination settings by combining temporal data and distance metrics

    Routledge, I., Unwin, H. J. T. & Bhatt, Samir, 2021, In: Scientific Reports. 11, 1, 14495.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Intrinsic randomness in epidemic modelling beyond statistical uncertainty

    Penn, M. J., Laydon, D. J., Penn, J., Whittaker, Charles Frederick, Morgenstern, C., Ratmann, O., Mishra, S., Pakkanen, M. S., Donnelly, C. A. & Bhatt, Samir, 2023, In: Communications Physics. 6, 1, 9 p., 146.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Leaping through Tree Space: Continuous Phylogenetic Inference for Rooted and Unrooted Trees

    Penn, M. J., Scheidwasser, Neil Alexandre, Penn, J., Donnelly, C. A., Duchene, David & Bhatt, Samir, 2023, In: Genome Biology and Evolution. 15, 12, 17 p., evad213.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Leveraging community mortality indicators to infer COVID-19 mortality and transmission dynamics in Damascus, Syria

    Watson, O. J., Alhaffar, M., Mehchy, Z., Whittaker, C., Akil, Z., Brazeau, N. F., Cuomo-Dannenburg, G., Hamlet, A., Thompson, H. A., Baguelin, M., FitzJohn, R. G., Knock, E., Lees, J. A., Whittles, L. K., Mellan, T., Winskill, P., Bhatt, S., Djaafara, B. A., Donnelly, C. A., Flaxman, S. & 15 others, Gaythorpe, K. A. M., Imai, N., Jauneikaite, E., Laydon, D. J., Mishra, S., Unwin, H. J. T., Verity, R., Howard, N., Clapham, H., Checchi, F., Ferguson, N., Ghani, A., Beals, E., Walker, P. & Imperial College COVID-19 Response Team, I. C. C. R. T., Jan 2021, In: Nature Communications. 12, 1, 13 p., 2394.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Long-Term Exposure to AIR Pollution and COVID-19 Mortality and Morbidity in DENmark: Who Is Most Susceptible? (AIRCODEN)

    Andersen, Zorana Jovanovic, Zhang, Jiawei, Lim, Youn-Hee, So, Rina, Jørgensen, J. T., Mortensen, Laust Hvas, Napolitano, George, Cole-Hunter, Thomas, Loft, Steffen, Bhatt, Samir, Hoek, G., Brunekreef, B., Westendorp, Rudi GJ, Ketzel, M., Brandt, J., Lange, Theis & Kølsen-Fisher, T., 2023, In: Research report (Health Effects Institute). 214, 41 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Long-term exposure to air pollution and risk of SARS-CoV-2 infection and COVID-19 hospitalization or death: Danish nationwide cohort study

    Zhang, Jiawei, Lim, Youn-Hee, So, Rina, Jørgensen, J. T., Mortensen, Laust Hvas, Napolitano, George, Cole-Hunter, Thomas, Loft, Steffen, Bhatt, Samir, Hoek, G., Brunekreef, B., Westendorp, Rudi GJ, Ketzel, M., Brandt, J., Lange, Theis, Kølsen-Fisher, T. & Andersen, Zorana Jovanovic, 2023, In: The European respiratory journal. 61, 6, 50 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Machine learning models of healthcare expenditures predicting mortality: A cohort study of spousal bereaved Danish individuals

    Katsiferis, Alexandros, Bhatt, Samir, Mortensen, Laust Hvas, Mishra, S., Jensen, Majken Karoline & Westendorp, Rudi GJ, 2023, In: PLoS ONE. 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Mapping malaria incidence using routine health facility surveillance data in Uganda

    Epstein, A., Namuganga, J. F., Nabende, I., Kamya, E. V., Kamya, M. R., Dorsey, G., Sturrock, H., Bhatt, Samir, Rodriguez-Barraquer, I. & Greenhouse, B., 2023, In: BMJ Global Health. 8, 5, 10 p., 011137.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Mask wearing in community settings reduces SARS-CoV-2 transmission

    Leech, G., Rogers-Smith, C., Monrad, J. T., Sandbrink, J. B., Snodin, B., Zinkov, R., Rader, B., Brownstein, J. S., Gal, Y., Bhatt, Samir, Sharma, M., Mindermann, S., Brauner, J. M. & Aitchison, L., 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 23, 9 p., e2119266119.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Published

    Misclassification bias in estimating clinical severity of SARS-CoV-2 variants – Authors' reply

    Nyberg, T., Ferguson, N. M., Blake, J., Hinsley, W., Bhatt, Samir, De Angelis, D., Thelwall, S. & Presanis, A. M., 2022, In: The Lancet. 400, 10355, p. 809-810 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  45. Published

    Modeling DREAMS impact: trends in new HIV diagnoses among women attending antenatal care clinics in DREAMS countries

    Saul, J., Cooney, C., Hosseini, P. R., Beamon, T., Toiv, N., Bhatt, Samir, Zaidi, I. & Birx, D., 2022, In: AIDS. 36, p. S51-S59 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Modelling the impact of the tier system on SARS-CoV-2 transmission in the UK between the first and second national lockdowns

    Laydon, D. J., Mishra, S., Hinsley, W. R., Samartsidis, P., Flaxman, S., Gandy, A., Ferguson, N. M. & Bhatt, Samir, 2021, In: BMJ Open. 11, 4, 6 p., e050346.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. No evidence of sustained nonzoonotic Plasmodium knowlesi transmission in Malaysia from modelling malaria case data

    Fornace, K. M., Topazian, H. M., Routledge, I., Asyraf, S., Jelip, J., Lindblade, K. A., Jeffree, M. S., Ruiz Cuenca, P., Bhatt, Samir, Ahmed, K., Ghani, A. C. & Drakeley, C., 2023, In: Nature Communications. 14, 1, 2945.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Novel Epidemic Metrics to Communicate Outbreak Risk at the Municipality Level: Dengue and Zika in the Dominican Republic

    Kingston, R., Routledge, I., Bhatt, Samir & Bowman, L. R., 2022, In: Viruses. 14, 1, 18 p., 162.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Potential impact of the COVID-19 pandemic on HIV, tuberculosis, and malaria in low-income and middle-income countries: a modelling study

    Hogan, A. B., Jewell, B. L., Sherrard-Smith, E., Vesga, J. F., Watson, O. J., Whittaker, C., Hamlet, A., Smith, J. A., Winskill, P., Verity, R., Baguelin, M., Lees, J. A., Whittles, L. K., Ainslie, K. E. C., Bhatt, S., Boonyasiri, A., Brazeau, N. F., Cattarino, L., Cooper, L. V., Coupland, H. & 34 others, Cuomo-Dannenburg, G., Dighe, A., Djaafara, B. A., Donnelly, C. A., Eaton, J. W., van Elsland, S. L., FitzJohn, R. G., Fu, H., Gaythorpe, K. A. M., Green, W., Haw, D. J., Hayes, S., Hinsley, W., Imai, N., Laydon, D. J., Mangal, T. D., Mellan, T. A., Mishra, S., Nedjati-Gilani, G., Parag, K. V., Thompson, H. A., Unwin, H. J. T., Vollmer, M. A. C., Walters, C. E., Wang, H., Wang, Y., Xi, X., Ferguson, N. M., Okell, L. C., Churcher, T. S., Arinaminpathy, N., Ghani, A. C., Walker, P. G. T. & Hallett, T. B., 1 Sep 2020, In: The Lancet Global Health. 8, 9, p. e1132-e1141

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Predicting mortality risk after a fall in older adults using health care spending patterns: a population-based cohort study

    Katsiferis, Alexandros, Mortensen, Laust Hvas, Khurana, Mark Poulsen, Mishra, S., Jensen, Majken Karoline & Bhatt, Samir, 2023, In: Age and Ageing. 52, 8, 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 255978193