Samir Bhatt

Samir Bhatt

Professor

ORCID: 0000-0002-0891-4611

Introductory remarks on publicationslist

Google Scholar publication list https://scholar.google.com/citations?user=tL0x_vUAAAAJ&hl=en


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  1. Published

    π VAE: a stochastic process prior for Bayesian deep learning with MCMC

    Mishra, S., Flaxman, S., Berah, T., Zhu, H., Pakkanen, M. & Bhatt, Samir, 2022, In: Statistics and Computing. 32, 6, 16 p., 96.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. A COVID-19 model for local authorities of the United Kingdom

    Mishra, S., Scott, J. A., Laydon, D. J., Zhu, H., Ferguson, N. M., Bhatt, Samir, Flaxman, S. & Gandy, A., 2022, In: Journal of the Royal Statistical Society. Series A: Statistics in Society. 185, p. S86-S95 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    A dataset of non-pharmaceutical interventions on SARS-CoV-2 in Europe

    Altman, G., Ahuja, J., Monrad, J. T., Dhaliwal, G., Rogers-Smith, C., Leech, G., Snodin, B., Sandbrink, J. B., Finnveden, L., Norman, A. J., Oehm, S. B., Sandkuehler, J. F., Kulveit, J., Flaxman, S., Gal, Y., Mishra, S., Bhatt, Samir, Sharma, M., Mindermann, S. & Brauner, J. M., 2022, In: Scientific Data. 9, 1, 9 p., 145.

    Research output: Contribution to journal › Editorial › Research › peer-review

  4. Published

    A novel statistical framework for exploring the population dynamics and seasonality of mosquito populations

    Whittaker, C., Winskill, P., Sinka, M., Pironon, S., Massey, C., Weiss, D. J., Nguyen, M., Gething, P. W., Kumar, A., Ghani, A. & Bhatt, Samir, 2022, In: Proceedings. Biological sciences. 289, 1972, 10 p., 20220089.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    A unified machine learning approach to time series forecasting applied to demand at emergency departments

    Vollmer, M. A. C., Glampson, B., Mellan, T., Mishra, S., Mercuri, L., Costello, C., Klaber, R., Cooke, G., Flaxman, S. & Bhatt, Samir, 2021, In: BMC Emergency Medicine. 21, 1, 14 p., 9.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    An archetypes approach to malaria intervention impact mapping: a new framework and example application

    Bertozzi-Villa, A., Bever, C. A., Gerardin, J., Proctor, J. L., Wu, M., Harding, D., Hollingsworth, T. D., Bhatt, Samir & Gething, P. W., 2023, In: Malaria Journal. 22, 1, 22 p., 138.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Application of referenced thermodynamic integration to Bayesian model selection

    Hawryluk, I., Mishra, S., Flaxman, S., Bhatt, Samir & Mellan, T. A., 2023, In: PLoS ONE. 18, 8, 16 p., e0289889.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

    Volz, E., Mishra, S., Chand, M., Barrett, J. C., Johnson, R., Geidelberg, L., Hinsley, W. R., Laydon, D. J., Dabrera, G., O’Toole, Á., Amato, R., Ragonnet-Cronin, M., Harrison, I., Jackson, B., Ariani, C. V., Boyd, O., Loman, N. J., McCrone, J. T., Gonçalves, S., Jørgensen, D. & 14 others, Myers, R., Hill, V., Jackson, D. K., Gaythorpe, K., Groves, N., Sillitoe, J., Kwiatkowski, D. P., Flaxman, S., Ratmann, O., Bhatt, Samir, Hopkins, S., Gandy, A., Rambaut, A. & Ferguson, N. M., 13 May 2021, In: Nature. 593, p. 266-269 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Assessment of COVID-19 as the Underlying Cause of Death Among Children and Young People Aged 0 to 19 Years in the US

    Flaxman, S., Whittaker, C., Semenova, E., Rashid, T., Parks, R. M., Blenkinsop, A., Unwin, H. J. T., Mishra, S., Bhatt, Samir, Gurdasani, D. & Ratmann, O., 2023, In: JAMA network open. 6, 1, 9 p., e2253590.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Cancer burden among adolescents and young adults in relation to childhood adversity: a nationwide life-course cohort study of 1.2 million individuals

    Rod, Naja Hulvej, Bengtsson, J., Elsenburg, Leonie K., Davies, Megan, Taylor-Robinson, D., Bhatt, Samir & Rieckmann, Andreas, 2023, In: The Lancet Regional Health - Europe. 27, 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Changing composition of SARS-CoV-2 lineages and rise of Delta variant in England

    Mishra, S., Mindermann, S., Sharma, M., Whittaker, C., Mellan, T. A., Wilton, T., Klapsa, D., Mate, R., Fritzsche, M., Zambon, M., Ahuja, J., Howes, A., Miscouridou, X., Nason, G. P., Ratmann, O., Semenova, E., Leech, G., Sandkuehler, J. F., Rogers-Smith, C., Vollmer, M. & 10 others, Unwin, H. J. T., Gal, Y., Chand, M., Gandy, A., Martin, J., Volz, E., Ferguson, N. M., Bhatt, Samir, Brauner, J. M. & Flaxman, S., 2021, In: EClinicalMedicine. 39, 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study

    Nyberg, T., Ferguson, N. M., Nash, S. G., Webster, H. H., Flaxman, S., Andrews, N., Hinsley, W., Bernal, J. L., Kall, M., Bhatt, S., Blomquist, P., Zaidi, A., Volz, E., Aziz, N. A., Harman, K., Funk, S., Abbott, S., Hope, R., Charlett, A., Chand, M. & 7 others, Ghani, A. C., Seaman, S. R., Dabrera, G., De Angelis, D., Presanis, A. M., Thelwall, S. & COVID 19 Genom UK COG UK Consortiu, C. 1. G. U. C. U. C., 2022, In: Lancet. 399, 10332, p. 1303-1312 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Comparing the responses of the UK, Sweden and Denmark to COVID-19 using counterfactual modelling

    Mishra, S., Scott, J. A., Laydon, D. J., Flaxman, S., Gandy, A., Mellan, T. A., Unwin, H. J. T., Vollmer, M., Coupland, Helen Louise, Ratmann, O., Monod, M., Zhu, H. H., Cori, A., Gaythorpe, K. A. M., Whittles, L. K., Whittaker, C., Donnelly, C. A., Ferguson, N. M. & Bhatt, Samir, 2021, In: Scientific Reports. 11, 1, 16342.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Conflicting COVID-19 excess mortality estimates

    Bager, P., Nielsen, J., Bhatt, Samir, Nielsen, L., Krause, T. G., Vestergaard, L. S. & The EuroMOMO Network, T. E. N., 2023, In: The Lancet. 401, 10375, p. 432-433 2 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  15. Published

    Context-specific emergence and growth of the SARS-CoV-2 Delta variant

    McCrone, J. T., Hill, V., Bajaj, S., Pena, R. E., Lambert, B. C., Inward, R., Bhatt, S., Volz, E., Ruis, C., Dellicour, S., Baele, G., Zarebski, A. E., Sadilek, A., Wu, N., Schneider, A., Ji, X., Raghwani, J., Jackson, B., Colquhoun, R., O’Toole, Á. & 21 others, Peacock, T. P., Twohig, K., Thelwall, S., Dabrera, G., Myers, R., Faria, N. R., Huber, C., Bogoch, I. I., Khan, K., du Plessis, L., Barrett, J. C., Aanensen, D. M., Barclay, W. S., Chand, M., Connor, T., Loman, N. J., Suchard, M. A., Pybus, O. G., Rambaut, A., Kraemer, M. U. G. & The COVID-19 Genomics UK (COG-UK) Consortium, T. C. G. U. (. C., 2022, In: Nature. 610, 7930, p. 154-160 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Danish Pathology Life Course (PATHOLIFE) cohort: a register based cohort extending upon a national tissue biobank

    Yde, Pernille, Bartholdy, Andreas, Gjerdrum, Lise Mette Rahbek, Westendorp, Rudi GJ, Mortensen, Laust Hvas, Bhatt, Samir & Jensen, Majken Karoline, 2023, In: BMJ Open. 13, 4, 10 p., e068483.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Database of epidemic trends and control measures during the first wave of COVID-19 in mainland China

    Fu, H., Wang, H., Xi, X., Boonyasiri, A., Wang, Y., Hinsley, W., Fraser, K. J., McCabe, R., Olivera Mesa, D., Skarp, J., Ledda, A., Dewé, T., Dighe, A., Winskill, P., van Elsland, S. L., Ainslie, K. E. C., Baguelin, M., Bhatt, S., Boyd, O., Brazeau, N. F. & 41 others, Cattarino, L., Charles, G., Coupland, Helen Louise, Cucunuba, Z. M., Cuomo-Dannenburg, G., Donnelly, C. A., Dorigatti, I., Eales, O. D., FitzJohn, R. G., Flaxman, S., Gaythorpe, K. A. M., Ghani, A. C., Green, W. D., Hamlet, A., Hauck, K., Haw, D. J., Jeffrey, B., Laydon, D. J., Lees, J. A., Mellan, T., Mishra, S., Nedjati-Gilani, G., Nouvellet, P., Okell, L., Parag, K. V., Ragonnet-Cronin, M., Riley, S., Schmit, N., Thompson, H. A., Unwin, H. J. T., Verity, R., Vollmer, M. A. C., Volz, E., Walker, P. G. T., Walters, C. E., Watson, O. J., Whittaker, C., Whittles, L. K., Imai, N., Bhatia, S. & Ferguson, N. M., 2021, In: International Journal of Infectious Diseases. 102, p. 463-471 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Effectiveness assessment of non-pharmaceutical interventions: lessons learned from the COVID-19 pandemic

    Lison, A., Banholzer, N., Sharma, M., Mindermann, S., Unwin, H. J. T., Mishra, S., Stadler, T., Bhatt, Samir, Ferguson, N. M., Brauner, J. & Vach, W., 2023, In: The Lancet Public Health. 8, 4, p. e311-e317 7 p.

    Research output: Contribution to journal › Review › Research › peer-review

  19. Published

    Effectiveness of social distancing measures and lockdowns for reducing transmission of COVID-19 in non-healthcare, community-based settings

    Murphy, C., Lim, W. W., Mills, C., Wong, J. Y., Chen, D., Xie, Y., Li, M., Gould, S., Xin, H., Cheung, J. K., Bhatt, Samir, Cowling, B. J. & Donnelly, C. A., 2023, In: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 381, 2257, 29 p., 20230132.

    Research output: Contribution to journal › Review › Research › peer-review

  20. Published

    Estimating fine age structure and time trends in human contact patterns from coarse contact data: The Bayesian rate consistency model

    Dan, S., Chen, Y., Chen, Y., Monod, M., Jaeger, V. K., Bhatt, Samir, Karch, A., Ratmann, O. & Machine Learning & Global Health network, M. L. &. G. H. N., 2023, In: PLOS Computational Biology. 19, 6, 30 p., e1011191.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe

    Flaxman, S., Mishra, S., Gandy, A., Unwin, H. J. T., Mellan, T. A., Coupland, H., Whittaker, C., Zhu, H., Berah, T., Eaton, J. W., Monod, M., Perez-Guzman, P. N., Schmit, N., Cilloni, L., Ainslie, K. E. C., Baguelin, M., Boonyasiri, A., Boyd, O., Cattarino, L., Cooper, L. V. & 31 others, Cucunubá, Z., Cuomo-Dannenburg, G., Dighe, A., Djaafara, B., Dorigatti, I., van Elsland, S. L., FitzJohn, R. G., Gaythorpe, K. A. M., Geidelberg, L., Grassly, N. C., Green, W. D., Hallett, T., Hamlet, A., Hinsley, W., Jeffrey, B., Knock, E., Laydon, D. J., Nedjati-Gilani, G., Nouvellet, P., Parag, K. V., Siveroni, I., Thompson, H. A., Verity, R., Volz, E., Walters, C. E., Wang, H., Wang, Y., Watson, O. J., Winskill, P., Bhatt, Samir & Imperial College COVID-19 Response Team, I. C. C. R. T., 2020, In: Nature. 584, 7820, p. 257-261 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Estimating the epidemic reproduction number from temporally aggregated incidence data: A statistical modelling approach and software tool

    Nash, R. K., Bhatt, Samir, Cori, A. & Nouvellet, P., 2023, In: PLOS Computational Biology. 19, 8, 14 p., e1011439.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Evidence of initial success for China exiting COVID-19 social distancing policy after achieving containment

    Ainslie, K. E. C., Walters, C. E., Fu, H., Bhatia, S., Wang, H., Xi, X., Baguelin, M., Bhatt, S., Boonyasiri, A., Boyd, O., Cattarino, L., Ciavarella, C., Cucunuba, Z., Cuomo-Dannenburg, G., Dighe, A., Dorigatti, I., van Elsland, S. L., John, R. F., Gaythorpe, K., Ghani, A. C. & 22 others, Green, W., Hamlet, A., Hinsley, W., Imai, N., Jørgensen, D., Knock, E., Laydon, D., Nedjati-Gilani, G., Okell, L. C., Siveroni, I., Thompson, H. A., Unwin, H. J. T., Verity, R., Vollmer, M., Walker, P. G. T., Wang, Y., Watson, O. J., Whittaker, C., Winskill, P., Donnelly, C. A., Ferguson, N. M. & Riley, S., 2021, In: Wellcome Open Research. 5, p. 1-14 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Evolution and epidemic spread of SARS-CoV-2 in Brazil

    Candido, D. S., Claro, I. M., de Jesus, J. G., Souza, W. M., Moreira, F. R. R., Dellicour, S., Mellan, T. A., du Plessis, L., Pereira, R. H. M., Sales, F. C. S., Manuli, E. R., Thézé, J., Almeida, L., Menezes, M. T., Voloch, C. M., Fumagalli, M. J., Coletti, T. M., da Silva, C. A. M., Ramundo, M. S., Amorim, M. R. & 58 others, Hoeltgebaum, H. H., Mishra, S., Gill, M. S., Carvalho, L. M., Buss, L. F., Prete, C. A., Ashworth, J., Nakaya, H. I., Peixoto, P. S., Brady, O. J., Nicholls, S. M., Tanuri, A., Rossi, Á. D., Braga, C. K. V., Gerber, A. L., de Guimarães, A. P. C., Gaburo, N., Alencar, C. S., Ferreira, A. C. S., Lima, C. X., Levi, J. E., Granato, C., Ferreira, G. M., Francisco, R. S., Granja, F., Garcia, M. T., Moretti, M. L., Perroud, M. W., Castiñeiras, T. M. P. P., Lazari, C. S., Hill, S. C., de Souza Santos, A. A., Simeoni, C. L., Forato, J., Sposito, A. C., Schreiber, A. Z., Santos, M. N. N., de Sá, C. Z., Souza, R. P., Resende-Moreira, L. C., Teixeira, M. M., Hubner, J., Leme, P. A. F., Moreira, R. G., Nogueira, M. L., Ferguson, N. M., Costa, S. F., Proenca-Modena, J. L., Vasconcelos, A. T. R., Bhatt, Samir, Lemey, P., Wu, C. H., Rambaut, A., Loman, N. J., Aguiar, R. S., Pybus, O. G., Sabino, E. C. & Faria, N. R., 4 Sep 2020, In: Science. 369, 6508, p. 1255-1260 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Gaussian Process Nowcasting: Application to COVID-19 Mortality Reporting

    Hawryluk, I., Hoeltgebaum, H., Mishra, S., Miscouridou, X., Schnekenberg, R. P., Whittaker, Charles Frederick, Vollmer, M., Flaxman, S., Bhatt, Samir & Mellan, T. A., 2021, p. 1258-1268. 11 p.

    Research output: Contribution to conference › Paper › Research › peer-review

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