Samir Bhatt

Samir Bhatt

Professor

ORCID: 0000-0002-0891-4611

Introductory remarks on publicationslist

Google Scholar publication list https://scholar.google.com/citations?user=tL0x_vUAAAAJ&hl=en


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  1. Vaccinating adolescents against SARS-CoV-2 in England: a risk–benefit analysis

    Gurdasani, D., Bhatt, Samir, Costello, A., Denaxas, S., Flaxman, S., Greenhalgh, T., Griffin, S., Hyde, Z., Katzourakis, A., McKee, M., Michie, S., Ratmann, O., Reicher, S., Scally, G., Tomlinson, C., Yates, C., Ziauddeen, H. & Pagel, C., 2021, In: Journal of the Royal Society of Medicine. 114, 11, p. 513-524 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Using hawkes processes to model imported and local malaria cases in near-elimination settings

    Unwin, J. T. H., Routledge, I., Flaxman, S., Rizoiu, M. A., Lai, S., Cohen, J., Weiss, D. J., Mishra, S. & Bhatt, Samir, 2021, In: PLOS Computational Biology. 17, 4, e1008830.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Unifying incidence and prevalence under a time-varying general branching process

    Pakkanen, M. S., Miscouridou, X., Penn, M. J., Whittaker, Charles Frederick, Berah, T., Mishra, S., Mellan, T. A. & Bhatt, Samir, 2023, In: Journal of Mathematical Biology. 87, 2, 34 p., 35.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach

    Routledge, I., Pascual, M. (ed.), Lai, S., Battle, K. E., Ghani, A. C., Gomez-Rodriguez, M., Gustafson, K. B., Mishra, S., Unwin, J., Proctor, J. L., Tatem, A. J., Li, Z. & Bhatt, Samir, 2020, (E-pub ahead of print) In: PLOS Computational Biology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Track Omicron's spread with molecular data

    Scott, L., Hsiao, N., Moyo, S., Singh, L., Tegally, H., Dor, G., Maes, P., Pybus, O. G., Kraemer, M. U. G., Semenova, E., Bhatt, Samir, Flaxman, S., Faria, N. R. & de Oliveira, T., 2021, In: Science. 374, 6574, p. 1454-1455 10 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  6. Published

    The overlapping burden of the three leading causes of disability and death in sub-Saharan African children

    LBD Triple Burden Collaborators, L. T. B. C., 2022, In: Nature Communications. 13, 1, 7457.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    The limits of the constant-rate birth-death prior for phylogenetic tree topology inference

    Khurana, Mark Poulsen, Scheidwasser, Neil Alexandre, Penn, M. J., Bhatt, Samir & Duchene, David, 2024, In: Systematic Biology.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. The impact of COVID-19 and strategies for mitigation and suppression in low- And middle-income countries

    Walker, P. G. T., Whittaker, C., Watson, O. J., Baguelin, M., Winskill, P., Hamlet, A., Djafaara, B. A., Cucunubá, Z., Mesa, D. O., Green, W., Thompson, H., Nayagam, S., Ainslie, K. E. C., Bhatia, S., Bhatt, S., Boonyasiri, A., Boyd, O., Brazeau, N. F., Cattarino, L., Cuomo-Dannenburg, G. & 29 others, Dighe, A., Donnelly, C. A., Dorigatti, I., Van Elsland, S. L., FitzJohn, R., Fu, H., Gaythorpe, K. A. M., Geidelberg, L., Grassly, N., Haw, D., Hayes, S., Hinsley, W., Imai, N., Jørgensen, D., Knock, E., Laydon, D., Mishra, S., Nedjati-Gilani, G., Okell, L. C., Unwin, H. J., Verity, R., Vollmer, M., Walters, C. E., Wang, H., Wang, Y., Xi, X., Lalloo, D. G., Ferguson, N. M. & Ghani, A. C., 2020, In: Science. 369, 6502, p. 413-422 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. The association between mechanical ventilator compatible bed occupancy and mortality risk in intensive care patients with COVID-19: a national retrospective cohort study

    Wilde, H., Mellan, T., Hawryluk, I., Dennis, J. M., Denaxas, S., Pagel, C., Duncan, A., Bhatt, Samir, Flaxman, S., Mateen, B. A. & Vollmer, S. J., 2021, In: BMC Medicine. 19, 1, 213.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    The Gompertz Law emerges naturally from the inter-dependencies between sub-components in complex organisms

    Yde, Pernille, Jensen, Majken Karoline, Mitarai, Namiko & Bhatt, Samir, 2024, In: Scientific Reports. 14, 1, 11 p., 1196.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Suppression of a SARS-CoV-2 outbreak in the Italian municipality of Vo’

    Lavezzo, E., Franchin, E., Ciavarella, C., Cuomo-Dannenburg, G., Barzon, L., Del Vecchio, C., Rossi, L., Manganelli, R., Loregian, A., Navarin, N., Abate, D., Sciro, M., Merigliano, S., De Canale, E., Vanuzzo, M. C., Besutti, V., Saluzzo, F., Onelia, F., Pacenti, M., Parisi, S. G. & 31 others, Carretta, G., Donato, D., Flor, L., Cocchio, S., Masi, G., Sperduti, A., Cattarino, L., Salvador, R., Nicoletti, M., Caldart, F., Castelli, G., Nieddu, E., Labella, B., Fava, L., Drigo, M., Gaythorpe, K. A. M., Ainslie, K. E. C., Baguelin, M., Bhatt, Samir, Boonyasiri, A., Boyd, O., Cattarino, L., Ciavarella, C., Coupland, Helen Louise, Cucunubá, Z., Cuomo-Dannenburg, G., Djafaara, B. A., Donnelly, C. A., Dorigatti, I., Mishra, S. & Imperial College COVID-19 Response Team, I. C. C. R. T., 2020, In: Nature. 584, 7821, p. 425-429 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. State-level tracking of COVID-19 in the United States

    Unwin, H. J. T., Mishra, S., Bradley, V. C., Gandy, A., Mellan, T. A., Coupland, H., Ish-Horowicz, J., Vollmer, M. A. C., Whittaker, C., Filippi, S. L., Xi, X., Monod, M., Ratmann, O., Hutchinson, M., Valka, F., Zhu, H., Hawryluk, I., Milton, P., Ainslie, K. E. C., Baguelin, M. & 33 others, Boonyasiri, A., Brazeau, N. F., Cattarino, L., Cucunuba, Z., Cuomo-Dannenburg, G., Dorigatti, I., Eales, O. D., Eaton, J. W., Elsland, S. L. V., FitzJohn, R. G., Gaythorpe, K. A. M., Green, W., Hinsley, W., Jeffrey, B., Knock, E., Laydon, D. J., Lees, J., Nedjati-Gilani, G., Nouvellet, P., Okell, L., Parag, K. V., Siveroni, I., Thompson, H. A., Walker, P., Walters, C. E., Watson, O. J., Whittles, L. K., Ghani, A. C., Ferguson, N. M., Riley, S., Donnelly, C. A., Bhatt, Samir & Flaxman, S., 2020, In: Nature Communications. 11, 6189 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Spatiotemporal and Seasonal Trends of Class A and B Notifiable Infectious Diseases in China: Retrospective Analysis

    Zheng, J., Zhang, N., Shen, G., Liang, F., Zhao, Y., He, X., Wang, Y., He, R., Chen, W., Xue, H., Shen, Y., Fu, Y., Zhang, W. H., Zhang, L., Bhatt, Samir, Mao, Y. & Zhu, B., 2023, In: JMIR Public Health and Surveillance. 9, 19 p., e42820.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals

    Brizzi, A., Whittaker, C., Servo, L. M. S., Hawryluk, I., Prete, C. A., de Souza, W. M., Aguiar, R. S., Araujo, L. J. T., Bastos, L. S., Blenkinsop, A., Buss, L. F., Candido, D., Castro, M. C., Costa, S. F., Croda, J., de Souza Santos, A. A., Dye, C., Flaxman, S., Fonseca, P. L. C., Geddes, V. E. V. & 21 others, Gutierrez, B., Lemey, P., Levin, A. S., Mellan, T., Bonfim, D. M., Miscouridou, X., Mishra, S., Monod, M., Moreira, F. R. R., Nelson, B., Pereira, R. H. M., Ranzani, O., Schnekenberg, R. P., Semenova, E., Sonabend, R., Souza, R. P., Xi, X., Sabino, E. C., Faria, N. R., Bhatt, Samir & Ratmann, O., 2022, In: Nature Medicine. 28, 7, p. 1476-1485 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Severity of respiratory tract infections depends on the infectious dose. Perspectives for the next pandemic

    Mølbak, Kåre, Sørensen, Thorkild I.A., Bhatt, Samir, Lyngse, Frederik Plesner, Simonsen, L. & Aaby, P., 2024, In: Frontiers in Public Health. 12, 4 p., 1391719.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Seq2Seq Surrogates of Epidemic Models to Facilitate Bayesian Inference

    Charles, G., Wolock, T. M., Winskill, P., Ghani, A., Bhatt, Samir & Flaxman, S., 2023, AAAI-23 Special Tracks. Williams, B., Chen, Y. & Neville, J. (eds.). AAAI Press, p. 14170-14177 8 p. (Proceedings of the 37th AAAI Conference on Artificial Intelligence, AAAI 2023, Vol. 37).

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  17. Published

    Semi-mechanistic Bayesian modelling of COVID-19 with renewal processes

    Bhatt, Samir, Ferguson, N., Flaxman, S., Gandy, A., Mishra, S. & Scott, J. A., 2023, In: Journal of the Royal Statistical Society. Series A: Statistics in Society. 186, 4, p. 633-636 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Seasonal variation in SARS-CoV-2 transmission in temperate climates: A Bayesian modelling study in 143 European regions

    Gavenciak, T., Monrad, J. T., Leech, G., Sharma, M., Mindermann, S., Bhatt, Samir, Brauner, J. & Kulveit, J., 2022, In: PLoS Computational Biology. 18, 8, 14 p., 1010435.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Seasonal dynamics of Anopheles stephensi and its implications for mosquito detection and emergent malaria control in the Horn of Africa

    Whittaker, Charles Frederick, Hamlet, A., Sherrard-Smith, E., Winskill, P., Cuomo-Dannenburg, G., Walker, P. G. T., Sinka, M., Pironon, S., Kumar, A., Ghani, A., Bhatt, Samir & Churcher, T. S., 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 8, 9 p., e2216142120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Risk of hospitalisation associated with infection with SARS-CoV-2 omicron variant versus delta variant in Denmark: an observational cohort study

    Bager, P., Wohlfahrt, J., Bhatt, S., Stegger, M., Legarth, R., Møller, C. H., Skov, R. L., Valentiner-Branth, P., Voldstedlund, M., Fischer, T. K., Simonsen, L., Kirkby, N. S., Thomsen, M. K., Spiess, K., Marving, E., Larsen, N. B., Lillebaek, T., Ullum, H., Mølbak, K., Krause, T. G. & 28 others, Edslev, S. M., Sieber, R. N., Ingham, A. C., Overvad, M., Agermose Gram, M., Kristensen Lomholt, F., Hallundbæk, L., Hjorth Espensen, C., Gubbels, S., Karakis, M., Lauenborg Møller, K., Schytte Olsen, S., Harboe, Zitta F B Barrella, Klint Johannesen, C., van Wijhe, M., Holler, J. G., Dessau, R. B. C., Barfred Friis, M., Fuglsang-Damgaard, D., Pinholt, M., Vognbjerg Sydenham, T., Coia, J. E., Marmolin, E. S., Fomsgaard, A., Fonager, J., Rasmussen, M., Cohen, A. & the Omicron-Delta study group, T. O. S. G., 2022, In: The Lancet Infectious Diseases. 22, 7, p. 967-976 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Resurgence of malaria in Uganda despite sustained indoor residual spraying and repeated long lasting insecticidal net distributions

    Epstein, A., Maiteki-sebuguzi, C., Namuganga, J. F., Nankabirwa, J. I., Gonahasa, S., Opigo, J., Staedke, S. G., Rutazaana, D., Arinaitwe, E., Kamya, M. R., Bhatt, Samir, Rodríguez-barraquer, I., Greenhouse, B., Donnelly, M. J., Dorsey, G. & Ashton, R. (ed.), 2022, In: PLOS Global Public Health. 2, 9, 18 p., e0000676.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Regularised B-splines Projected Gaussian Process Priors to Estimate Time-trends in Age-specific COVID-19 Deaths

    Monod, M., Blenkinsop, A., Brizzi, A., Chen, Y., Cardoso Correia Perello, C., Jogarah, V., Wang, Y., Flaxman, S., Bhatt, Samir & Ratmann, O., 2023, In: Bayesian Analysis. 18, 3, 31 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Reduction in mobility and COVID-19 transmission

    Nouvellet, P., Bhatia, S., Cori, A., Ainslie, K. E. C., Baguelin, M., Bhatt, S., Boonyasiri, A., Brazeau, N. F., Cattarino, L., Cooper, L. V., Coupland, H., Cucunuba, Z. M., Cuomo-Dannenburg, G., Dighe, A., Djaafara, B. A., Dorigatti, I., Eales, O. D., van Elsland, S. L., Nascimento, F. F., FitzJohn, R. G. & 30 others, Gaythorpe, K. A. M., Geidelberg, L., Green, W. D., Hamlet, A., Hauck, K., Hinsley, W., Imai, N., Jeffrey, B., Knock, E., Laydon, D. J., Lees, J. A., Mangal, T., Mellan, T. A., Nedjati-Gilani, G., Parag, K. V., Pons-Salort, M., Ragonnet-Cronin, M., Riley, S., Unwin, H. J. T., Verity, R., Vollmer, M. A. C., Volz, E., Walker, P. G. T., Walters, C. E., Wang, H., Watson, O. J., Whittaker, Charles Frederick, Whittles, L. K., Xi, X. & Ferguson, N. M., 2021, In: Nature Communications. 12, 1, 1090.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Quantifying Changes in Vaccine Coverage in Mainstream Media as a Result of the COVID-19 Outbreak: Text Mining Study

    Christensen, B., Laydon, D., Chelkowski, T., Jemielniak, D., Vollmer, M., Bhatt, Samir & Krawczyk, K., 2022, In: JMIR Infodemiology. 2, 2, 15 p., e35121.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. E-pub ahead of print

    Pyfectious: An individual-level simulator to discover optimal containment policies for epidemic diseases

    Mehrjou, A., Soleymani, A., Abyaneh, A., Bhatt, Samir, Schölkopf, B. & Bauer, S., 2024, (E-pub ahead of print) In: PLOS Computational Biology. 19, 1, e1010799.

    Research output: Contribution to journal › Journal article › Research › peer-review

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